Insertion junction: CLIP2.061101_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061101
Chromosome:chromosome 9
Location:4533110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCATGCACGCACGACCGATACCGTACCGCAAGCCGTTTGCGCGTTAG
Internal bar code:GGTCCATCCATTCAAAGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTGATGTTCCGCCAT
Suggested primer 2:TATGCCGTATCTGTCACCGC