Insertion junction: CLIP2.061101_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061101
Chromosome:chromosome 9
Location:4533115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGATTAGGTCGTCTGGTTGACCCGTCTGGGTAGACCAAGAAAGTGAGT
Internal bar code:CACATCATAAATTGTGTGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5486
LEAP-Seq percent confirming:99.4083
LEAP-Seq n confirming:168
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:169

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCCGTATCTGTCACCGC
Suggested primer 2:CTTCCCTGATGTTCCGCCAT