Insertion junction: CLIP2.061103_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061103
Chromosome:chromosome 1
Location:3639925
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g023650 Probable amino acid/metabolite permease; (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTCCGTTTGCTTTTCCACACACCTTCCCCCCCTTCTTAATTAATCAT
Internal bar code:CCGCTCGGACATGCCGCATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:229
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCAGGTATGGGGTGGAGG
Suggested primer 2:CAGAAGGAGGTGTGCAGGAG