Insertion junction: CLIP2.061104_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061104
Chromosome:chromosome 7
Location:2730159
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g331200 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACAGTACACGATGAGGGCAATCTCCCAATCCCTCGCATGCCCACAA
Internal bar code:TAGCAGGCAAGGTGGCCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGCAAGCACTCTGGA
Suggested primer 2:GGGCGGAGTTCAAAGTCTGA