Insertion junction: CLIP2.061105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061105
Chromosome:chromosome 2
Location:7858175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146000 (1 of 1) K14798 - protein LTV1 (LTV1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCCTCACATCAGTTTGGTGCGCCAGCAGCCAGTCCAAAACGTGGAC
Internal bar code:GTCTGGCTAATGTGGGTTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTCATAGCCGTCATCA
Suggested primer 2:TATGACATTGCCCAGCAGCA