Insertion junction: CLIP2.061111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061111
Chromosome:mitogenome
Location:10569
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802343 ChrepMp07,nad1,801499 NADH dehydrogenase subunit 1; (1 of 1) K03878 - NADH-ubiquinone oxidoreductase chain 1 (ND1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTCCAATGATTAGTTTTGTACTAAGCCAAGTCGCTTGGGTTGGCATT
Internal bar code:GGTGCGCAATAGCAATAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAGTCCATACAAAAGCG
Suggested primer 2:TTTCTGGGACGGATGCTTCC