Insertion junction: CLIP2.061112_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061112
Chromosome:chromosome 3
Location:7201497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207950 (1 of 1) K15216 - RNA polymerase I-specific transcription initiation factor RRN3 (RRN3, TIFIA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCCCCTTGCCCTGCGACCTCACAGCTTGCACAGCGCCTACCTGCGG
Internal bar code:GTTATGGATAAAATCTTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCTTGCTGGTACGCAGC
Suggested primer 2:TCGGCGAGAAACAATGGACA