Insertion junction: CLIP2.061115_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061115
Chromosome:chromosome 10
Location:3932350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446700 ANK28 (1 of 2) PTHR24161:SF17 - PALMITOYLTRANSFERASE; Predicted protein with ankyrin repeats 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACACAAACTTCCGATTTCGGTCCGTGCTCCTGAAGCTTACGTCTCTT
Internal bar code:ACACCAATGCTTGTGGGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4388
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCGCGCCTATAGAGCCC
Suggested primer 2:CGTTGTCAGGACTGTCCACA