Insertion junction: CLIP2.061121_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061121
Chromosome:chromosome 1
Location:8205959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g071662 ACS1 Acetyl-CoA synthetase/ligase; (1 of 3) K01895 - acetyl-CoA synthetase (ACSS, acs) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTCAATCTCCCATTCGTGCCGTGCATCCATCTCGAAACAGAAACTC
Internal bar code:ATGTATTTTAAAGCTTCGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGGGTGTTGAGAGGTT
Suggested primer 2:AGGTCACCAAGCATCACCTG