Insertion junction: CLIP2.061129_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061129
Chromosome:chromosome 3
Location:4278552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800328 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTATGCACTGTGCCCACGGCACCGCATTCCTACTGTAGTTCGGCGA
Internal bar code:CCTTAGCGAGCACAAGTCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:17.7778
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAACTGACACATTCCGG
Suggested primer 2:GACCACGCACAGCAAACATT