Insertion junction: CLIP2.061131_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061131
Chromosome:chromosome 17
Location:3329343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722650 3'UTR
Cre17.g802066 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCCTGCCATCTGTCCCTGCCTACAGTACGACATATCGTACCCTCTG
Internal bar code:GTTGAGGTTAGGAGTGGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1308
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGTGCGTAGTAAAGGG
Suggested primer 2:GGGGAGGAGTTTGTGTAGGC