Insertion junction: CLIP2.061137_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061137
Chromosome:chromosome 6
Location:4913172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280800 (1 of 1) K11291 - nuclear autoantigenic sperm protein (NASP) 3'UTR
Cre06.g280850 PBG1 20S proteasome beta subunit, type 4; (1 of 1) K02736 - 20S proteasome subunit beta 7 (PSMB4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATATCATGGTTACAGCACCGGACGCCCCTGAGTGGACCCCGCATGGC
Internal bar code:CGGGGGTTCGGGCTAGAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1969
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCTGATGGCCTGGGACA
Suggested primer 2:AACAAGTTCCAGGTGGCCAA