Insertion junction: CLIP2.061146_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061146
Chromosome:chromosome 12
Location:697157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492900 (1 of 3) PF01661 - Macro domain (Macro) outside_mRNA
Cre12.g492950 NSG5,DIV15,RIR1 (1 of 1) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1); Ribonucleoside-diphosphate reductase R1 subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAATGCCCACAATGCATGGGCTGCACACCGCTCACACCGTCCTCTTC
Internal bar code:GGAATGCGACGCGGTTACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGGGTGGTCTTTTTC
Suggested primer 2:AACGGTGGACTGTGGGTTTT