Insertion junction: CLIP2.061159_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061159
Chromosome:chromosome 6
Location:8269391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306850 HEL31 (1 of 1) K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGAGCAGGGCCGCGACCACCGCAACGACGACGGATGTTGATGCGTTG
Internal bar code:AACTGCGTGGTCTGTTCTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2406
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTACTCGCATTCCCCT
Suggested primer 2:GCTCCATCTCCCCAACATCC