Insertion junction: CLIP2.061160_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061160
Chromosome:chromosome 16
Location:6672454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673300 Chlamydomonas-specific family W protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACACGTGCGCACACTGTCATCACTAGGCTACGGCCGCACAGGCCAC
Internal bar code:TACAACCCTGCGGATGGTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAACATGGAAGGGGTCAA
Suggested primer 2:GTGTCGGTCAGGTGAACCAT