Insertion junction: CLIP2.061169_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061169
Chromosome:chromosome 6
Location:2359496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268000 HFO10 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGATGAGTTCGGTTAATTGAAAAAAAAGAAAGCTGTGAGTTAAATGA
Internal bar code:GGACAAGGCCGGCCGATTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1466
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGAGTTTTGTTGGGGT
Suggested primer 2:ATGTTACCAGCCTGCAGACC