Insertion junction: CLIP2.061171_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061171
Chromosome:chromosome 1
Location:7801371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACCCAAAGGAAGAACTGTACCCAACTGGGGGGGTGAAGCCTTGGGTG
Internal bar code:TTGTTTTCTTATTTCTTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCACCCTACATCCCAGAT
Suggested primer 2:TGAAGAGAGGATGCCGAGGA