Insertion junction: CLIP2.061172_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061172
Chromosome:chromosome 16
Location:6625967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673852 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGAAAGATCGCTAAAGAAAGAAAAATTCAGCGGTTATCAGCCCGCGC
Internal bar code:GAATCTAATTACTCACGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTCAAGTGACATCCGC
Suggested primer 2:AAGCTGAGCAAACAAGCGTG