Insertion junction: CLIP2.061173_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061173
Chromosome:chromosome 16
Location:5119698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685500 (1 of 2) IPR006652//IPR011043 - Kelch repeat type 1 // Galactose oxidase/kelch, beta-propeller 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTAGCCAGGGCCCGTCAGCTTCGAATCCCTAAACCAGCGTTTTTCG
Internal bar code:GGGTCCGCAACCCCTGTGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2830
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGTGACTCGCGCGATAG
Suggested primer 2:ACTCATACTTCCCGCCCTCT