Insertion junction: CLIP2.061179_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061179
Chromosome:chromosome 6
Location:3504892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278116 (1 of 1) IPR008136 - CinA, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTTCCTTGCTGCTTGTCGTGTGCGCTGGCTGTGATAGGGAACAGCTT
Internal bar code:TTAAATGATGCTCCGAAAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCGGGAAAGAAGGGGC
Suggested primer 2:GGAGGCTGTGCAAAACCTTG