Insertion junction: CLIP2.061180_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061180
Chromosome:chromosome 12
Location:5110206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801421 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACAGCAGGTTGGCGGGCTTCAGGTCGAAGTGCATGTAGCCGCGAGCG
Internal bar code:TGGAAAGGCTGAGCGTTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:46.875
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCCCAATCAAGCAGGT
Suggested primer 2:CCACAACTCTGTTTGGCGTG