Insertion junction: CLIP2.061191_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061191
Chromosome:chromosome 3
Location:1672681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153050 RWP1 (1 of 1) IPR000104//IPR003035 - Antifreeze protein, type I // RWP-RK domain; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTAACCGGGGCACTAGGGTCCCCCCAAACGTCCAGGCTCCGCGCCCC
Internal bar code:TGGATATTTTTCACACAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCAGATACAGTCGGATG
Suggested primer 2:TACAGGAGGTGAGCCGATGA