Insertion junction: CLIP2.061200_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061200
Chromosome:chromosome 6
Location:4927686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281000 (1 of 52) PF00856 - SET domain (SET) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACGCGGTGGATGCAGGACGCAGTGGTTGACCACCTAACCGCCCAAGC
Internal bar code:TTCCCGCGTTCGGGGCTTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CATAAAGAGGCCCGTGGTGT
Suggested primer 2:CTCGGAGAAGCGAATCACGA