Insertion junction: CLIP2.061202_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061202
Chromosome:chromosome 12
Location:1281906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489600 (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTAGCTAGTGTGGCCATAGGATGGGCGCGCAGTTTGGGTATGCTGC
Internal bar code:GAGGTTATGCTCCGGCGGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAACCCCATCGCATGC
Suggested primer 2:GCCAGTTTTCCACCAGCTTG