Insertion junction: CLIP2.061204_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061204
Chromosome:chromosome 7
Location:787598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317950 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre07.g318000 (1 of 2) PTHR12847//PTHR12847:SF3 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // NECAP-LIKE PROTEIN CG9132 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATATGTACGCCTGTCAATCGACCTTGAGTGACCTCTTCAGTGTCGCG
Internal bar code:AGGGCGGCTACACAGGCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCAATTGCAGCTCCGTA
Suggested primer 2:TGTTCCCACCCAATTACCCG