Insertion junction: CLIP2.061215_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061215
Chromosome:chromosome 6
Location:6138113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291550 (1 of 133) IPR012336 - Thioredoxin-like fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTATCCCTCTCTGCAATTCCACAGACCACCCTGCCAATACGGTACC
Internal bar code:CCGATGATCCTCGCTTTGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTCGTTCACTCGTTCA
Suggested primer 2:TTCGGCTCTAGTGCGTTTGT