Insertion junction: CLIP2.061215_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061215
Chromosome:chromosome 6
Location:6138119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291550 (1 of 133) IPR012336 - Thioredoxin-like fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTTTTGGGCAAGCGTGTGCCCTACTGCCCTGTGCTGTGGCCCGATG
Internal bar code:GCCTCCCTTGCAAGGGCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGCTCTAGTGCGTTTGT
Suggested primer 2:CAGGGTCGTTCACTCGTTCA