Insertion junction: CLIP2.061216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061216
Chromosome:chromosome 13
Location:3441816
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g587100 PCYA1,PCYA Phycocyanobilin ferredoxin oxidoreductase-like protein; (1 of 1) 1.3.7.5 - Phycocyanobilin:ferredoxin oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGATTGAAGGGGGCACCTGTGGCACATCAGTTCGCAGCTCGTGCAGCA
Internal bar code:GCGTTGAGAGGGGGATGGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACAGCACGCACAATCG
Suggested primer 2:GTGTGTGTGTGTGTGCGTAC