Insertion junction: CLIP2.061219_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061219
Chromosome:chromosome 17
Location:5447072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738850 (1 of 1) IPR000104//IPR003169 - Antifreeze protein, type I // GYF domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTTAGGCTGCAGCGTGCGTGGCTGTTGGGCGGGTCGGGTCGGGTTG
Internal bar code:ATGATGTCTATCAGAGACCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGAGTTGCACAAGCCAC
Suggested primer 2:TTCCGCAGCTGGCTCAAATA