Insertion junction: CLIP2.061224_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061224
Chromosome:chromosome 3
Location:1891726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACATATGGCCAGACCAGTTTGCCAGTTTGGGTGGCCCACACGCGCTC
Internal bar code:GTATATTTGGTATTACGCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGTTTGCTGGCGTGAA
Suggested primer 2:CCGGTGCGCTAGGCTAAATA