Insertion junction: CLIP2.061225_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061225
Chromosome:chromosome 2
Location:7133167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390208 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA
Cre09.g390245 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTTGTTGCTCGTGATGTATGGCATGGAACAACATTTAGGCTTTTAGC
Internal bar code:ATAGTCCCAGGGGGGCTGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGGCTGGCTTTGATGA
Suggested primer 2:TATGCGGACATTATGGCGCT