Insertion junction: CLIP2.061230_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061230
Chromosome:chromosome 10
Location:2431632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435300 AAP1 Aspartyl aminopeptidase-like protein; (1 of 1) 3.4.11.21 - Aspartyl aminopeptidase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACACATGGGCGCAAAACTTGGTGCAATTCCGGTTTGCATGCAGCCCT
Internal bar code:AAGGTTGTTTGTTGTTTGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAAAGTCCATGGCCCAT
Suggested primer 2:CTGCTGGTCTCTTCCCCAAG