Insertion junction: CLIP2.061232_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061232
Chromosome:chromosome 17
Location:3956423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728200 (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCAAGGGCTCCAGGCCGCCTTTAGACCAAGCGCCGGGCGAAAATGGG
Internal bar code:GTTACAAACATCTAACTCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAATTTGAGCAAGGGGC
Suggested primer 2:TACCCCTGATTACCTGCCGA