Insertion junction: CLIP2.061236_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061236
Chromosome:chromosome 17
Location:3781626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726800 (1 of 1) PTHR15975//PTHR15975:SF0 - UNCHARACTERIZED // CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGTCATGCCTAGGAGGGGCAACGAAACGTCTGTACGTCTTATAAAC
Internal bar code:CTGGGCGCTAGAAGTTGTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCAGGACAAGTACGT
Suggested primer 2:GTATCCGGATGCCCAGTCAG