Insertion junction: CLIP2.061250_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061250
Chromosome:chromosome 9
Location:5797335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411250 (1 of 60) IPR001611 - Leucine-rich repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGCATGCACGCATGCGCGTGACAACAACGTCTTAATGCCGCCTCCT
Internal bar code:TAGGTTAACTGAGGTGCGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATCCCTTTCACCCTCC
Suggested primer 2:GTCCTCTGGAAGCTGTGTCC