Insertion junction: CLIP2.061273_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061273
Chromosome:chromosome 1
Location:2092576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCGGATCCGGAAGATATCACCCGGGAGAAGGCAACCACTACACATAG
Internal bar code:TAGGAGGGGGATACCGTAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1708
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGTGTGTCATGCGTG
Suggested primer 2:GGAATGCCGCAACCAAGTTT