Insertion junction: CLIP2.061280_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061280
Chromosome:chromosome 4
Location:2247360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGTGGTCCAGCGCGCGCTGAACTTGAAACCGCCGGCAGTGTGACG
Internal bar code:ATTTGTTTCGCATAACCAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1769
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACTGTGTTTGTCGGGCC
Suggested primer 2:CGCTATTGCATTGGGTTCGG