Insertion junction: CLIP2.061281_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061281
Chromosome:chromosome 9
Location:2261807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394850 TEF24 LrgB-like protein; (1 of 1) PTHR30249 - PUTATIVE SEROTONIN TRANSPORTER 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATCCGGACGGCGTGTGTGCCATACCGTATGCACCGTCGCCCTGCTG
Internal bar code:TCCTTTTAGGGATACTGTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2130
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTAGCGGATGGAGGATG
Suggested primer 2:ATACTTCACGGTCGACACGG