Insertion junction: CLIP2.061286_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061286
Chromosome:chromosome 6
Location:4304336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278261 (1 of 1) PTHR13774:SF17 - PHENAZINE BIOSYNTHESIS-LIKE DOMAIN-CONTAINING PROTEIN 3'UTR
Cre06.g800672 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTTTCGGGAAGCGTTACAGCATGTGACCACCCGGGCGTACTGCAAGC
Internal bar code:TTTTGTACGGTGTTCTGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACAAGCTCGTCCTGTGT
Suggested primer 2:GCTCCTGTTCTGTGACTGCT