Insertion junction: CLIP2.061287_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061287
Chromosome:chromosome 5
Location:1325637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241653 (1 of 25) IPR001965//IPR011011//IPR013083//IPR019787 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, PHD-finger 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAATGGAGGAGGAGGTGGGGTCGGCGACAATGTAGAGGGCGCCCGGC
Internal bar code:ATGGTGTGCCTAGTAGGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3878
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTGTCAGTGCTGCTACA
Suggested primer 2:CCGTCATCCTTGCTCCACTT