Insertion junction: CLIP2.061291_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061291
Chromosome:chromosome 11
Location:156489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467541 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCTCGCTCCACTCACACCGCCCCCCAGCGGCTGCTGGAGGCGGAGG
Internal bar code:GAAGAAAAAAGCATGGATCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTGTGCACGTGACTAT
Suggested primer 2:GTGGGGGATGGGGGAAAATT