Insertion junction: CLIP2.061297_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061297
Chromosome:chromosome 9
Location:2461774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393200 HSP70C (1 of 1) K04043 - molecular chaperone DnaK (dnaK); Heat shock protein 70C 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGGCTCATGTTACAAACATGGCAAGTCTGGTGTCTGCCTCACAGCC
Internal bar code:AGGATATCGTATCGAGCATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGATGCTCCGTTGATTG
Suggested primer 2:TGCAATTTTGTGACCGCTGG