Insertion junction: CLIP2.061298_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061298
Chromosome:chromosome 17
Location:3943795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728050 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCACAAACAACAGGATGCAGAAAGATCGCGTGGTGAGCTGGCGTGGAC
Internal bar code:GACTGATTGCTGGGGAGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4070
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGGTTTGCCAGTAAGGA
Suggested primer 2:TGCCCTCTCATCCATCTCCA