Insertion junction: CLIP2.061298_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061298
Chromosome:chromosome 17
Location:3943803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728050 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGTCATGGCCCCCGCCCACGTGTCGCCATATGCTTTGGGGTTTGGG
Internal bar code:GACTGATTGCTGGGGAGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTCTCATCCATCTCCA
Suggested primer 2:GACGGGTTTGCCAGTAAGGA