Insertion junction: CLIP2.061305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061305
Chromosome:chromosome 5
Location:3400341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232950 (1 of 1) K13110 - microfibrillar-associated protein 1 (MFAP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTGCTTGGCCACAACCAACGCCACGTCAAGGCCACACACACACATA
Internal bar code:TGGACGTTTGTAGACCTGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACGTGGGAACGACCAG
Suggested primer 2:TCGCCTTCACCACAGTACAC