Insertion junction: CLIP2.061307_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061307
Chromosome:chromosome 1
Location:866687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCACAGGCGGTAGGGTGCCACCACCTCCTCCGCCTGGCCGGTGCGGA
Internal bar code:TATCTTAATTTGATCAACACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4436
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACAACTCCAACCGTCA
Suggested primer 2:CGAGCGGCATCATCAGTAGT