Insertion junction: CLIP2.061307_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061307
Chromosome:chromosome 6
Location:7761211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303050 NIT3 NADH-cytochrome b5 reductase domain protein; (1 of 2) 1.7.1.1 - Nitrate reductase (NADH) / Nitrate reductase (NADH(2)) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGGGCTCCCAAAAGAACCTCAGGGCCCCTGTCGCAAAGCGCAGGGG
Internal bar code:ATCTGTATTGATCTATAACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1702
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTATGCGATAGGTGTGT
Suggested primer 2:ACAGAACTGTGGAGATGGCG