Insertion junction: CLIP2.061309_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061309
Chromosome:chromosome 17
Location:4635632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732500 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGGTCACCGCAGCCTCCCGGCATCCTGTGCCTAGTGAGCCGTGAGA
Internal bar code:AAGAGTTGAGAATTCAGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2991
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCATCTCGGCTCTCGAC
Suggested primer 2:TACGTGAAGCCATGCTGGTT