Insertion junction: CLIP2.061315_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061315
Chromosome:chromosome 12
Location:5426429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529500 RRM11 (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase; Putative ribosomal RNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGCAGGCCGGGAACCGCTTCAGAAACCCATTCTCAAACTCCCAACA
Internal bar code:GGCTGTGTCGTTGTGGGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4970
LEAP-Seq percent confirming:99.115
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCTTGAGCCCTGACTC
Suggested primer 2:CTTTGTTGCAGCTGTGGGTC