Insertion junction: CLIP2.061315_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061315
Chromosome:chromosome 12
Location:5426432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529500 RRM11 (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase; Putative ribosomal RNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAAAGCACAGGGCAACGAACATGCATGGCGGCTGTGACATAGCACTG
Internal bar code:GGCTGTGTCGTTGTGGGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1887
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTTGCAGCTGTGGGTC
Suggested primer 2:ATGTGCTTGAGCCCTGACTC